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[GR-63516] Unsafe allocation causes deadlock/crash #10912

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Open
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Tracked by #1326
sgammon opened this issue Mar 24, 2025 · 2 comments
Open
1 task done
Tracked by #1326

[GR-63516] Unsafe allocation causes deadlock/crash #10912

sgammon opened this issue Mar 24, 2025 · 2 comments
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@wirthi
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bug native-image truffle

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@sgammon
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sgammon commented Mar 24, 2025 •
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Describe the Issue

While building a Python-enabled native image at latest (24.2.x), a crash surfaces for certain stdlib imports (in this case, import json).

It appears an unsafe allocation attempts to raise a MissingReflectionRegistrationError, which walks the stack to describe what happened. But, the VM is in a state where it cannot block, and so a crash occurs.

Using the latest version of GraalVM can resolve many issues.

GraalVM Version

java version "24" 2025-03-18
Java(TM) SE Runtime Environment Oracle GraalVM 24+36.1 (build 24+36-jvmci-b01)
Java HotSpot(TM) 64-Bit Server VM Oracle GraalVM 24+36.1 (build 24+36-jvmci-b01, mixed mode, sharing)

Operating System and Version

Linux 5.15.167.4-microsoft-standard-WSL2 #1 SMP Tue Nov 5 00:21:55 UTC 2024 x86_64 x86_64 x86_64 GNU/Linux

Build Command

Expand for full build command 
--exclude-config
\Q/home/sam/.gradle/caches/modules-2/files-2.1/io.netty/netty-codec-http/4.1.118.Final/eda08a71294afe78c779b85fd696bc13491507a8/netty-codec-http-4.1.118.Final.jar\E
^/META-INF/native-image/.*
--exclude-config
\Q/home/sam/.gradle/caches/modules-2/files-2.1/io.netty/netty-handler/4.1.118.Final/30ebb05b6b0fb071dbfcf713017c4a767a97bb9b/netty-handler-4.1.118.Final.jar\E
^/META-INF/native-image/.*
--exclude-config
\Q/home/sam/.gradle/caches/modules-2/files-2.1/io.netty/netty-resolver-dns/4.1.118.Final/ff5bfb643ccc5a809c4c21b10167b8d214ceaeeb/netty-resolver-dns-4.1.118.Final.jar\E
^/META-INF/native-image/.*
--exclude-config
\Q/home/sam/.gradle/caches/modules-2/files-2.1/io.netty/netty-common/4.1.118.Final/4bb0f9899146484fa89f7b9bc27389d5b8e2ecde/netty-common-4.1.118.Final.jar\E
^/META-INF/native-image/.*
--exclude-config
\Q/home/sam/.gradle/caches/modules-2/files-2.1/io.netty/netty-buffer/4.1.118.Final/7022990af1e0d449f9d5322035899745e19735c5/netty-buffer-4.1.118.Final.jar\E
^/META-INF/native-image/.*
--exclude-config
\Q/home/sam/.gradle/caches/modules-2/files-2.1/io.netty/netty-transport/4.1.118.Final/5a27232e5d08218722d94ca14f0b1b4576e7711c/netty-transport-4.1.118.Final.jar\E
^/META-INF/native-image/.*
--exclude-config
\Q/home/sam/.gradle/caches/modules-2/files-2.1/io.netty/netty-codec-http2/4.1.118.Final/e3c35c0685ec9e84c4f84b79feea7c9d185a08d3/netty-codec-http2-4.1.118.Final.jar\E
^/META-INF/native-image/.*
-cp
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--no-fallback
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--initialize-at-run-time=oshi.software.os.unix.openbsd
--initialize-at-run-time=oshi.software.os.unix.openbsd.OpenBsdOperatingSystem
--initialize-at-run-time=oshi.software.os.unix.solaris
--initialize-at-run-time=oshi.software.os.unix.solaris.SolarisOperatingSystem
--initialize-at-run-time=oshi.util.platform.mac.CFUtil
--initialize-at-run-time=oshi.util.platform.mac.SmcUtil
--initialize-at-run-time=oshi.util.platform.mac.SysctlUtil
-g
-H:NativeLinkerOption=-flto
-H:NativeLinkerOption=-Wl,--gc-sections
-H:NativeLinkerOption=-Wl,--emit-relocs
-H:NativeLinkerOption=-lm
-H:NativeLinkerOption=/home/sam/workspace/elide/target/x86_64-unknown-linux-gnu/debug/libdiag.a
-H:NativeLinkerOption=/home/sam/workspace/elide/target/x86_64-unknown-linux-gnu/debug/libsqlitejdbc.a
-H:NativeLinkerOption=/home/sam/workspace/elide/target/x86_64-unknown-linux-gnu/debug/libumbrella.a
-H:NativeLinkerOption=/home/sam/workspace/elide/target/x86_64-unknown-linux-gnu/debug/libjs.a
-H:NativeLinkerOption=/home/sam/workspace/elide/target/x86_64-unknown-linux-gnu/debug/libposix.a
-H:NativeLinkerOption=/home/sam/workspace/elide/target/x86_64-unknown-linux-gnu/debug/libterminal.a
-H:ExcludeResources=.*dylib
-H:ExcludeResources=.*jnilib
-H:ExcludeResources=.*dll
-H:ExcludeResources=META-INF/native/libsqlitejdbc-linux-amd64.so
-H:ExcludeResources=lib/osx-aarch64/libbrotli.dylib
-H:ExcludeResources=META-INF/native/libnetty_transport_native_epoll_x86_64.so
-H:ExcludeResources=META-INF/native/libnetty_transport_native_kqueue_x86_64.jnilib
--initialize-at-run-time=io.netty.channel.kqueue.Native
--initialize-at-run-time=io.netty.channel.kqueue.Native
--initialize-at-run-time=io.netty.channel.kqueue.KQueueEventLoop
--static-nolibc
-H:NativeLinkerOption=-lssl
-H:NativeLinkerOption=-lcrypto
-H:NativeLinkerOption=-lstdc++
--gc=serial
-R:MaximumHeapSizePercent=80
-H:InitialCollectionPolicy=Adaptive
-H:+AuxiliaryEngineCache
-Delide.vm.engine.preinitialize=true
-J-Xmx36g
--parallelism=30
-Delide.strict=true
-Delide.natives=/home/sam/workspace/elide/target/x86_64-unknown-linux-gnu/debug
-Delide.root=/home/sam/workspace/elide
-Delide.target=x86_64-unknown-linux-gnu
-Delide.graalvm.ee=true
-Delide.mosaic=false
-Delide.staticJni=true
-Delide.langResources=/home/sam/workspace/elide/packages/cli/build/native/nativeCompile/resources
-Delide.targetLibc=glibc
-Delide.js.vm.enableStreams=true
-Delide.kotlin.version=2.1.20
-Delide.kotlin.verbose=false
-Delide.nativeTransport.v2=false
-Djna.library.path=/home/sam/workspace/elide/target/x86_64-unknown-linux-gnu/debug
-Djna.boot.library.path=/home/sam/workspace/elide/target/x86_64-unknown-linux-gnu/debug
-Dio.netty.allocator.type=adaptive
-Dio.netty.native.deleteLibAfterLoading=false
-Dio.netty.native.detectNativeLibraryDuplicates=false
-Dio.netty.native.tryPatchShadedId=false
-Djava.net.preferIPv4Stack=true
-Dlogback.statusListenerClass=ch.qos.logback.core.status.NopStatusListener
-Dnetworkaddress.cache.ttl=10
-Dpolyglotimpl.DisableVersionChecks=false
-Duser.country=US
-Duser.language=en
-Dorg.sqlite.lib.path=/home/sam/workspace/elide/target/x86_64-unknown-linux-gnu/debug
-Dorg.sqlite.lib.exportPath=/home/sam/workspace/elide/target/x86_64-unknown-linux-gnu/debug
-Dio.netty.native.workdir=/home/sam/workspace/elide/target/x86_64-unknown-linux-gnu/debug
-Djava.util.concurrent.ForkJoinPool.common.parallelism=2
-H:IncludeLocales=en
--native-compiler-options=-DELIDE
--native-compiler-options=-fstack-protector-strong
--native-compiler-options=-fexceptions
--native-compiler-options=-ffunction-sections
--native-compiler-options=-fdata-sections
--native-compiler-options=-fstack-clash-protection
-H:ResourceConfigurationFiles=/home/sam/workspace/elide/packages/cli/src/config/resource-config-linux-amd64.json
-Delide.target.buildRoot=/home/sam/workspace/elide/packages/cli/build/native/nativeCompile

Expected Behavior

Should report the missing reflection so that it can be registered.

Actual Behavior

Instead, it crashes.

Steps to Reproduce

  1. Clone Elide at the branch fix/python-imports
  2. Run the test script with ./gradlew :packages:cli:run --args="run $PWD/tools/scripts/py_json.py"
  3. Observe that the test script works on JVM
  4. Run the native build with ./gradlew :packages:cli:nativeCompile --no-configuration-cache
  5. Run the test script with ./packages/cli/build/native/nativeCompile/elide ./tools/scripts/py_json.py
  6. Observe the crash

Bundle:
https://repro.elide.dev/repro/elide-py-native-crash/elide.nib.xz

The test script consists of:

import json

def emit_json():
    return json.dumps([1, 2, 3])

if __name__ == "__main__":
    print(emit_json())

Additional Context

No response

Build Log Output and Error Messages

See crash:

native-image-py-crash.txt
@sgammon sgammon mentioned this issue Mar 25, 2025
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@chumer chumer assigned wirthi and unassigned chumer Mar 25, 2025
@chumer
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chumer commented Mar 25, 2025

Looks like an SVM related problem. Reassigned to @wirthi

@sgammon
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sgammon commented Mar 25, 2025

For now we are working around this with -H:+AllowUnsafeAllocationOfAllInstantiatedTypes

@wirthi wirthi changed the title [Native Image] Unsafe allocation causes deadlock/crash [GR-63516] Unsafe allocation causes deadlock/crash Mar 27, 2025
@sgammon sgammon mentioned this issue Mar 27, 2025
Merged
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@sgammon @fniephaus @chumer @wirthi